Explore Projects
Discover 42 open source projects
Showing 21-40 of 42 projects
lh3/seqtk
A C-based toolkit for processing sequences in FASTA/Q formats, focused on bioinformatics and sequence analysis.
shenwei356/seqkit
A cross-platform and ultrafast toolkit for FASTA/Q file manipulation, focused on bioinformatics workflows.
MultiQC/MultiQC
MultiQC aggregates bioinformatics analysis results into a single report.
crazyhottommy/getting-started-with-genomics-tools-and-resources
A collection of Unix, R, and Python tools for bioinformatics and data science projects.
harvardinformatics/learning-bioinformatics-at-home
Resources for learning bioinformatics, not a developer discovery platform for vibe coders.
ai-boost/awesome-ai-for-science
A curated list of awesome AI tools, libraries, papers, datasets, and frameworks for scientific discovery.
mims-harvard/TDC
A multimodal framework for drug discovery and therapeutic science research.
lightaime/deep_gcns_torch
A PyTorch library for Deep Graph Convolutional Networks (DeepGCNs) and other graph neural network models.
steineggerlab/foldseek
Foldseek is a fast and sensitive tool for comparing large sets of protein structures, enabling rapid bioinformatics analysis.
scikit-bio/scikit-bio
A versatile Python library for bioinformatics, providing data structures, algorithms, and educational resources.
a-r-j/graphein
Graphein is a Python library for building and analyzing protein interaction graphs for drug discovery and computational biology.
shenwei356/csvtk
A cross-platform, efficient and practical CSV/TSV toolkit written in Go for bioinformatics and data processing.
kexinhuang12345/DeepPurpose
A deep learning toolkit for drug discovery, drug-target interaction, and protein function prediction.
scipipe/scipipe
Robust and flexible pipeline tool for scientific and bioinformatics workflows written in Go.
sib-swiss/training-collection
A collection of bioinformatics training materials written in Python for developers working with biological data.
plotly/react-plotly.js
A React component for creating interactive data visualizations using the Plotly.js library.
shenwei356/rush
A parallel job execution tool for developers that supports cross-platform execution.
kblin/ncbi-genome-download
Scripts to download genomes from the NCBI FTP servers for bioinformatics and genomics research.
broadinstitute/cromwell
Cromwell is a scalable, open-source workflow engine for scientific workloads, particularly in bioinformatics.
moshi4/pyCirclize
A Python library for creating circular data visualizations like Circos plots, chord diagrams, and radar charts.
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