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lammps/lammps

LAMMPS is an open-source molecular dynamics simulation software package for researchers and developers working in computational chemistry and physics.

2.8K
Active
C++
API Frameworks
Databases
#molecular-dynamics#simulation#computational-chemistry

deepmodeling/deepmd-kit

A deep learning package for many-body potential energy representation and molecular dynamics

1.9K
Active
Python
ML Ops
Databases
Python
#computational-chemistry#molecular-dynamics#deep-learning

openmm/openmm

OpenMM is a high-performance GPU-accelerated toolkit for molecular simulation and dynamics.

1.8K
Active
C++
Computer Vision
API Frameworks
#molecular-dynamics#simulation#scientific-computing

MDAnalysis/mdanalysis

A Python library to analyze molecular dynamics simulations.

1.5K
Active
Python
React
#molecular-dynamics#mdanalysis#python

lmmentel/awesome-python-chemistry

A curated list of Python packages for chemistry, including computational chemistry, molecular dynamics, and quantum chemistry.

1.4K
Stable
Databases
CLI Tools
#chemistry#computational-chemistry#molecular-dynamics

BradyAJohnston/MolecularNodes

A Python-based toolbox for creating molecular animations in Blender, powered by Geometry Nodes.

1.2K
Active
Python
Animation & Motion
Databases
#biochemistry#blender#molecular-graphics

FoldingAtHome/coronavirus

A COVID-19 research project that uses molecular dynamics simulations to understand the SARS-CoV-2 virus.

1.1K
Archived
Python
Computer Vision
API Frameworks
Python
#covid-19#molecular-dynamics#sars-cov-2

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